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1
vote
Extract substring between n and m delimiter
With zsh:
print -rC1 -- input/*.mcool(N:t:r:r:r:r)
(where the :t modifier gets you the tail, and :r the root (removes an extension) of the file like in csh or vim).
Or:
set -o histsubstpattern
print -...
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0
votes
Extract substring between n and m delimiter
If you know that it is the third /and fourth ., you may as well use awk and define fields according to / and . as delimiters:
awk -F'[./]' '{print $7}'
- 11.8k
0
votes
Extract substring between n and m delimiter
If all input looks like
./../input/A001C007.hg38.nodups.pairs.mcool
then the probably easiest approach is:
start cmd:> sed -e 's+^./../input/++' -e 's/\..*$//' input
A001C007
A001C008
If you want ...
- 86.5k
3
votes
Extract substring between n and m delimiter
for pathname in input/*.mcool; do
basename "${pathname%%.*}"
done
This iterates over all names in the directory input that end in .mcool. For each pathname in $pathname, the pathname ...
- 316k
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