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Questions tagged [datascience-anaconda]

package manager, an environment manager, a Python/R data science distribution. Has a CLI command named “conda”. Contrast the usage of this tag with installer-anaconda, the system installation program used by Fedora, Red Hat Enterprise Linux, and others.

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GCC-11 installation error in centos 7 (environmental changes)?

I installed the latest version of GCC 11.2V using conda, conda install -c conda-forge gcc" in my linux server (Centos7). After I try to login into my server, after login it shows some weird ...
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1 answer
406 views

Launch terminal and 'conda activate env' from bash script

I've seen some similar questions on here, but they haven't covered this particular use-case and I haven't been able to make it work on my own. I'm trying to do the following using a script: Open a ...
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Why non-root python installation can work across the whole cluster?

I recently installed anaconda (which includes a python3) locally in my account folder on a cluster with a dozen of nodes (each node with several cores). I use it to install some package P that is used ...
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2 answers
895 views

how to modify the anaconda environment prompt in zsh?

To make my command line prompt look prettier on zsh, I added this line to .zshrc: PROMPT='%F{green}%n%f %B%F{blue}%1~%f%b $ ' However, when I activate an anaconda virtual environment (i.e. conda ...
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I cannot activate conda as www-data user

I am having some issues running a certain command. I'm running a LAMP-stack on Ubuntu 18.04.5 LTS on a Linode. In addition to this, I have also setup an anaconda3 environment on the server as well. ...
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I cannot use the bash command "clear" in my terminal

I started cleaning out files from my home directory. I recall deleting two files "bash" and "anaconda3" which may be contributing to my problem. In any case, I attempted to use the ...
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1 answer
100 views

Hyper terminal and conda prints empty line when starting

I have and "aesthetic" problem regarding my Hyper terminal. When I start it, (probably) something happens in the ~/.zshrc file and it prints and ugly empty line with a % in the terminal. I ...
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I installed anaconda and since then I am getting (base) in the terminal, and it has slowed the system down

I know it will go away when I type in conda deactivate but that is not it, I have also seen that my system has slowed down since I installed Anaconda. It was because of this, I have been fiddling ...
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1 answer
1k views

Installed Anaconda on Pop!_OS, but it is not running

I have installed Conda properly, and it is working. I did singh@zeppelin:~$ source~/anaconda3/bin/activate root (base) singh@zeppelin:~$ anaconda-navigator I get the Anaconda Ring that says ...
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1 vote
1 answer
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creating new environment in specified directory

my current situation is that I am trying to create a conda environment for some bioinformatics work in a shared server. My assigned home directory with my account only has storage for 10G and I need ...
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-2 votes
1 answer
1k views

Ubuntu Cronjob can't execute conda environment

Whenever I login to my ec2 Ubuntu instance my terminal is like this (base) ubuntu@ip-xx-xx-xx When I run my Python script which is converted from a Jupyter notebook with the default conda ...
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718 views

cp: invalid option -- 'h'

I'm using Ubuntu and I'm trying to install this Python package via Anaconda. I followed the steps as they are in the link, and when I type cp -Ri $THIS_DIR/PackageFiles/Scripts $CMDIR (line 59 onwards)...
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4 votes
2 answers
7k views

How to install awscli on Ubuntu 18.04?

This should be trivial but it seems that it is not. I formatted my comp and installed conda(I am used to this package tool) pip install awscli --upgrade --user Requirement already up-to-date: awscli ...
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-1 votes
1 answer
372 views

How to correctly modify the ~/.bashrc file

I am a beginner using bash and hence only know basic commands in the terminal. Nothing deeper than that. I have come across the following error programming in a Jupyter Notebook: OSError: No command ...
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Why does "alias python=/usr/local/bin/python3.7" keep getting appended to my .zshrc every time I open up a homebrew managed version of Anaconda?

I run a fairly stock .zshrc configuration. Stock meaning only a couple of aliases and a theme. But every time I open my .zshrc, I see several appended lines that all say this: "alias python=/usr/...
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Cuda with Conda installation - libcuda.so.1 not found

I've been trying to install CONDA with Cuda in Centos 7. I am following this installation. When I go through with the install I get no errors thrown until I try to import tensorflow in the environment....
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752 views

Why does conda not use symlinks for duplicate dependencies? [closed]

I wondered whether conda actually made duplicate files for certain dependencies shared by independent environments. I installed two environments env1 and env2. Then I installed the same module ...
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1 vote
1 answer
2k views

Apache mod_wsgi with conda python 3 -- can't load module

I recently posted this question to clear a hurdle in launching a Flask webapp on my Amazon ec2 RedHat 7 instance. In brief, I am attempting to launch a Flask webapp via an Anaconda environment using ...
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Troubles installing Anaconda on Python

I am currently attempting to install Anaconda on my Linux shell. I download and check the hash code of my downloaded file, provide a directory and so on. However, my Unix refuses to execute the script....
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1 answer
4k views

Run python code from cron in an Anaconda environment

I need to run a python script using a specific anaconda environment, since I need to execute this script several times per day I would like to do it using the linux crontab file (/etc/crontab). When ...
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1 answer
7k views

Installing Anaconda on Linux Mint without messing up preinstalled Python?

I've used on Anaconda with Python 3.x on Windows for years now. It has tons of features that out of the box that I use every day that cannot be easily installed on the bare-bones Python 2.7 that Linux ...
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1 vote
1 answer
3k views

PATH variable for anaconda in Fedora [closed]

After installing Anaconda in /opt/anaconda3 i modified ~/.bashrc for my user by adding PATH variable # .bashrc # Source global definitions if [ -f /etc/bashrc ]; then . /etc/bashrc fi # ...
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ImportError: /usr/lib64/libxml2.so.2: version `LIBXML2_2.9.0' not found

I am trying to install Hue on Centos 6.6 and configure it to point to a cluster that is running on Centos 7. The yum installation does not work on Centos 6 and hence I am trying to do the installation ...
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5 votes
3 answers
18k views

Running a Python script in Conda virtual environment as service

I recently wrote a Python program that is designed to communicate via SMPP SMS server. The issue I'm facing is that I don't know how to run a Python script as a service on my Cent OS server using ...
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1 vote
0 answers
1k views

Added anaconda2 lib to LD_LIBRARY_PATH, results in "no version information available" warning

To compile a program (Caffe) I added my anaconda2 libraries to .bashrc as follows: export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/local/anaconda2/lib/ However, now when I run ls or find I get the ...
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1 vote
1 answer
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What are the unreadable characters in Linux Anaconda install script?

The Anaconda for Linux installation scripts contain about 750 lines of a pretty straightforward set of bash commands, but they are then followed with 1.4 million lines of characters unreadable (at ...
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1 vote
2 answers
8k views

Set Path for all Users (Login and Non-login Shells)

Ok. So, I'm used to Ubuntu and CentOS more than redhat, so I'm hoping there's some obvious solution to this that I'm missing. I've installed Anaconda (Python). I've placed it in: /opt/anaconda3 I ...
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323 views

Continuum Anaconda Fedora 22 path

After an update to Windows 10 caused problems in my dual boot system I had to reinstall Fedora 22. So, starting with a fresh system I reinstalled my work environment. The one installation that has ...
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3 votes
1 answer
19k views

"mkdir: cannot create directory ‘/opt/anaconda’:Permission denied"

I just installed Ubuntu. I downloaded the anaconda python package and am trying to install it, bash Anaconda-2.1.0-Linux-x86_64.sh at some point the terminal says: Anaconda will now be installed ...
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