Can I configure my Linux system for more aggressive file system caching?

Question

I am neither concerned about RAM usage (as I've got enough) nor about losing data in case of an accidental shut-down (as my power is backed, the system is reliable and the data are not critical). But I do a lot of file processing and could use some performance boost.

That's why I'd like to set the system up to use more RAM for file system read and write caching, to prefetch files aggressively (e.g. read-ahead the whole file accessed by an application in case the file is of sane size or at least read-ahead a big chunk of it otherwise) and to flush writing buffers less frequently. How to achieve this (may it be possible)?

I use ext3 and ntfs (I use ntfs a lot!) file systems with XUbuntu 11.10 x86.

Answer 1

Improving disk cache performance in general is more than just increasing the file system cache size unless your whole system fits in RAM in which case you should use RAM drive (tmpfs is good because it allows falling back to disk if you need the RAM in some case) for runtime storage (and perhaps an initrd script to copy system from storage to RAM drive at startup).

You didn't tell if your storage device is SSD or HDD. Here's what I've found to work for me (in my case sda is a HDD mounted at /home and sdb is SSD mounted at /).

First optimize the load-stuff-from-storage-to-cache part:

Here's my setup for HDD (make sure AHCI+NCQ is enabled in BIOS if you have toggles):

echo cfq > /sys/block/sda/queue/scheduler
echo 10000 > /sys/block/sda/queue/iosched/fifo_expire_async
echo 250 > /sys/block/sda/queue/iosched/fifo_expire_sync
echo 80 > /sys/block/sda/queue/iosched/slice_async
echo 1 > /sys/block/sda/queue/iosched/low_latency
echo 6 > /sys/block/sda/queue/iosched/quantum
echo 5 > /sys/block/sda/queue/iosched/slice_async_rq
echo 3 > /sys/block/sda/queue/iosched/slice_idle
echo 100 > /sys/block/sda/queue/iosched/slice_sync
hdparm -q -M 254 /dev/sda

Worth noting for the HDD case is high fifo_expire_async (usually write) and long slice_sync to allow a single process to get high throughput (set slice_sync to lower number if you hit situations where multiple processes are waiting for some data from the disk in parallel). The slice_idle is always a compromise for HDDs but setting it somewhere in range 3-20 should be okay depending on disk usage and disk firmware. I prefer to target for low values but setting it too low will destroy your throughput. The quantum setting seems to affect throughput a lot but try to keep this as low as possible to keep latency on sensible level. Setting quantum too low will destroy throughput. Values in range 3-8 seem to work well with HDDs. The worst case latency for a read is (quantum * slice_sync) + (slice_async_rq * slice_async) ms if I've understood the kernel behavior correctly. The async is mostly used by writes and since you're willing to delay writing to disk, set both slice_async_rq and slice_async to very low numbers. However, setting slice_async_rq too low value may stall reads because writes cannot be delayed after reads any more. My config will try to write data to disk at most after 10 seconds after data has been passed to kernel but since you can tolerate loss of data on power loss also set fifo_expire_async to 3600000 to tell that 1 hour is okay for the delay to disk. Just keep the slice_async low, though, because otherwise you can get high read latency.

The hdparm command is required to prevent AAM from killing much of the performance that AHCI+NCQ allows. If your disk makes too much noise, then skip this.

Here's my setup for SSD (Intel 320 series):

echo cfq > /sys/block/sdb/queue/scheduler
echo 1 > /sys/block/sdb/queue/iosched/back_seek_penalty
echo 10000 > /sys/block/sdb/queue/iosched/fifo_expire_async
echo 20 > /sys/block/sdb/queue/iosched/fifo_expire_sync
echo 1 > /sys/block/sdb/queue/iosched/low_latency
echo 6 > /sys/block/sdb/queue/iosched/quantum
echo 2 > /sys/block/sdb/queue/iosched/slice_async
echo 10 > /sys/block/sdb/queue/iosched/slice_async_rq
echo 1 > /sys/block/sdb/queue/iosched/slice_idle
echo 20 > /sys/block/sdb/queue/iosched/slice_sync

Here it's worth noting the low values for different slice settings. The most important setting for an SSD is slice_idle which must be set to 0-1. Setting it to zero moves all ordering decisions to native NCQ while setting it to 1 allows kernel to order requests (but if the NCQ is active, the hardware may override kernel ordering partially). Test both values to see if you can see the difference. For Intel 320 series, it seems that setting slide_idle to 0 gives the best throughput but setting it to 1 gives best (lowest) overall latency.

For more information about these tunables, see http://www.linux-mag.com/id/7572/.

Now that we have configured kernel to load stuff from disk to cache with sensible performance, it's time to adjust the cache behavior:

According to benchmarks I've done, I wouldn't bother setting read ahead via blockdev at all. Kernel default settings are fine.

Set system to prefer swapping file data over application code (this does not matter if you have enough RAM to keep whole filesystem and all the application code and all virtual memory allocated by applications in RAM). This reduces latency for swapping between different applications over latency for accessing big files from a single application:

echo 15 > /proc/sys/vm/swappiness

If you prefer to keep applications nearly always in RAM you could set this to 1. If you set this to zero, kernel will not swap at all unless absolutely necessary to avoid OOM. If you were memory limited and working with big files (e.g. HD video editing), then it might make sense to set this close to 100.

I nowadays (2017) prefer to have no swap at all if you have enough RAM. Having no swap will usually lose 200-1000 MB of RAM on long running desktop machine. I'm willing to sacrifice that much to avoid worst case scenario latency (swapping application code in when RAM is full). In practice, this means that I prefer OOM Killer to swapping. If you allow/need swapping, you might want to increase /proc/sys/vm/watermark_scale_factor, too, to avoid some latency. I would suggest values between 100 and 500. You can consider this setting as trading CPU usage for lower swap latency. Default is 10 and maximum possible is 1000. Higher value should (according to kernel documentation) result in higher CPU usage for kswapd processes and lower overall swapping latency.

Next, tell kernel to prefer keeping directory hierarchy in memory over file contents in case some RAM needs to be freed (again, if everything fits in RAM, this setting does nothing):

echo 10 > /proc/sys/vm/vfs_cache_pressure

Setting vfs_cache_pressure to low value makes sense because in most cases, the kernel needs to know the directory structure before it can use file contents from the cache and flushing the directory cache too soon will make the file cache next to worthless. Consider going all the way down to 1 with this setting if you have lots of small files (my system has around 150K 10 megapixel photos and counts as "lots of small files" system). Never set it to zero or directory structure is always kept in memory even if the system is running out of the memory. Setting this to big value is sensible only if you have only a few big files that are constantly being re-read (again, HD video editing without enough RAM would be an example case). Official kernel documentation says that "increasing vfs_cache_pressure significantly beyond 100 may have negative performance impact".

Finally tell the kernel to use up to 99% of the RAM as cache for writes and instruct kernel to use up to 50% of RAM before slowing down the process that's writing (default for dirty_background_ratio is 10). Warning: I personally would not do this but you claimed to have enough RAM and are willing to lose the data.

echo 99 > /proc/sys/vm/dirty_ratio
echo 50 > /proc/sys/vm/dirty_background_ratio

And tell that 1h write delay is ok to even start writing stuff on the disk (again, I would not do this):

echo 360000 > /proc/sys/vm/dirty_expire_centisecs
echo 360000 > /proc/sys/vm/dirty_writeback_centisecs

If you put all of those to /etc/rc.local and include following at the end, everything will be in cache as soon as possible after boot (only do this if your filesystem really fits in the RAM):

(nice find / -type f -and -not -path '/sys/*' -and -not -path '/proc/*' -print0 2>/dev/null | nice ionice -c 3 wc -l --files0-from - > /dev/null)&

Or a bit simpler alternative which might work better (cache only /home and /usr, only do this if your /home and /usr really fit in RAM):

(nice find /home /usr -type f -print0 | nice ionice -c 3 wc -l --files0-from - > /dev/null)&

Answer 2

Firstly, I DO NOT recommend you continue using NTFS, as ntfs implemention in Linux would be performance and security trouble at any time.

There are several things you can do:

• use some newer fs such as ext4 or btrfs
• try to change your io scheduler, for example bfq
• turn off swap
• use some automatic preloader like preload
• use something like systemd to preload while booting
• ... and something more

Maybe you want to give it a try :-)

Answer 3

Read ahead:

On 32 bit systems:

blockdev --setra 8388607 /dev/sda

On 64 bit systems:

blockdev --setra 4294967295 /dev/sda

Write behind cache:

echo 100 > /proc/sys/vm/dirty_ratio

This will use up to 100% of your free memory as write cache.

Or you can go all out and use tmpfs. This is only relevant if you have RAM enough. Put this in /etc/fstab. Replace 100G with the amount of physical RAM.

tmpfs /mnt/tmpfs tmpfs size=100G,rw,nosuid,nodev 0 0

Then:

mkdir /mnt/tmpfs; mount -a

Then use /mnt/tmpfs.

Answer 4

You can set the read-ahead size with blockdev --setra sectors /dev/sda1, where sectors is the size you want in 512 byte sectors.

Answer 5

My killer setting is very simple and very effective:

echo "2000" > /proc/sys/vm/vfs_cache_pressure

The explanation from kernel documentation:

vfs_cache_pressure

Controls the tendency of the kernel to reclaim the memory which is used for caching of directory and inode objects.

At the default value of vfs_cache_pressure=100 the kernel will attempt to reclaim dentries and inodes at a "fair" rate with respect to pagecache and swapcache reclaim. Decreasing vfs_cache_pressure causes the kernel to prefer to retain dentry and inode caches. When vfs_cache_pressure=0, the kernel will never reclaim dentries and inodes due to memory pressure and this can easily lead to out-of-memory conditions. Increasing vfs_cache_pressure beyond 100 causes the kernel to prefer to reclaim dentries and inodes.

vfs_cache_pressure at 2000 causes that most of computing happens in the RAM and very late disk writes.