4

Some more information:

I was backing up a large directory with tar, only there were a couple of large files there that I didn't expect. This connection is over the network and very slow, so simply waiting it out is not an option.

None of these files have anything important in them.

I erased the content of the first few with the echo > file, which preserved the link so tar would stop reading them, but then I and rm -rf'd an entire directory while tar was reading a 2GB file in that directory. Now, tar holds the only link to it, and I can't seem to find any way of making it move on it short of starting over completely.

The file is on an ext4 filesystem being accessed over the network by sshfs.

  • 1
    (NAA since I have no box here to check the details, but I think you can access that file through /proc/(pid of tar)/fd/(number) or somesuch, and maybe you can truncate it with echo as you did with the others.) – Ulrich Schwarz Sep 30 '15 at 21:46
  • You could probably trace tar with gdb or similar and force it to think it found EOF on that file... (Not posting as an answer because this requires a lot of explaining and some testing—anyone else who wants to is welcome to steal the idea for his/her answer.) – derobert Sep 30 '15 at 21:48
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    You could run gdb, attach to the tar process, get it to stop during a read() from the file, then give gdb the return (int)-1 command to make tar think the read failed. – Mark Plotnick Sep 30 '15 at 21:49
  • @Mark I think gdb has a way to break on functions.. This sounds like it could work. – Functino Sep 30 '15 at 21:51
  • I think it also provides a way to override the return value, so you could return 0, signaling EOF. – Functino Sep 30 '15 at 21:58
4

echo >file would have been the straightforward solution. But once you've deleted the file, that's no longer possible.

But wait! Since you're using an ext4 filesystem, I presume that this tar is running on Linux. (Some but not all other Unix variants allow a similar solution.) On Linux, you can still access a deleted-but-open file via /proc/PID/fd/FD where PID is the process ID of the process that has the file open and FD is the file descriptor through which the file is open. This file is a symbolic link to the file, but it's a magic one. It remains valid even if the file is deleted. If you look at it with ls -l, you'll see something like

/proc/1234/fd/4 -> /path/to/file (deleted)

in all appearance a broken link, but you actually can open this file. In particular, you can truncate it with something like : >/proc/1234/fd/4.

If you're working on a system without /proc, you can use a debugger to cause the tar process itself to perform the truncation for you. Attach the debugger to the process, then make it execute truncate(4) where 4 is the file descriptor that tar is reading from. For example, with GDB, you can try something like

$ ps
…     find the PID of the tar process, e.g. 1234
$ lsof -p1234
…     find the file descriptor that you want to act on, e.g. 4
$ gdb -pid 1234
…
(gdb) call truncate(4)
(gdb) detach

This may or may not confuse tar as it could render some data structure that it's using inconsistent, so I recommend experimenting before trying it out for real.

1

Stop the tar?

ps aux | grep tar

Find the pid of the tar process

kill $PID
  • Unfortunately, this means starting over a procedure that's already taken a long time. I'll probably wait another hour and if there really is no way to simply tell tar to "forget about this one," I'll bite the bullet. – Functino Sep 30 '15 at 21:42

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