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One option to do a quick test could be to use a KGDB enabled kernel and stop the kernel manually and test, see this link. On another note, things I remember that could cause your pauses: cpufreq, cat /sys/devices/system/cpu/cpu0/cpufreq/cpuinfo_transition_latency, the value is in ns (4000 in my AMD FX(tm)-8120 Eight-Core Processor) shouldn't be a problem, ...

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