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Sort aligned columns

I have a program which output looks like this # Status VAL1 VAL2 Description 1 some text 2.5 4.4 Some long other text 5 some text 2 14.5 2.0 Some long other ...
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How to match 2 large file and print the difference in shell script

I have 2 files. File1 has 400k numerical records. e.g: 1 2 3 4 5 6 .. and so on File 2 also has 420k numerical records. e.g: 1 2 3 4 6 .. and so on Both these file are in unsorted manner. I want ...