1
vote
1answer
41 views

Store output from one command and process it for another

I am working on Unix command line. I have two files. I want to cat file1.txt and grep the output in file2.txt File1.txt 123A 223A 143A 153A 183A 123J 123P File2.txt: 123A (TYU) 223A (RUT) 143A ...
1
vote
4answers
42 views

Parsing complex text file using Unix commands

I have the following text structure which I would like to parse: >Cluster 423 0 56aa, >HWI-ST1448:257:C3V2HACXX:1:1106:19087:2550.1... at 92.86% 1 64aa, ...
-2
votes
2answers
49 views

Grep and cut the selected field

I am trying to cut the field if a line starts with a particular name, cat $1|while read line do if [ "$1" = "custbills.cmp" ]; then acc_no=`grep "^Custbills" $1 | cut -c29-43` acc_type=`grep ...
3
votes
3answers
176 views

Get the part of a line before the last slash

I'm trying to write a conky script that shows my MPD album art, a 'folder.jpg' in the album folder. My current plan is to use mpc -f %file%, which prints out the file name and path, and then cut out ...
5
votes
7answers
497 views

How to find a position of a character using grep?

I need to identify the postion of a character in string using grep command. Example, the string is RAMSITALSKHMAN|1223333. grep -n '[^a-zA-Z0-9\$\~\%\#\^]' How do I find the position of | in the ...
2
votes
1answer
24 views

Get each column which contains multiple spaces?

My file: subnet 172.25.10.0 netmask 255.255.255.0 { option domain-name-servers 172.25.10.9, 8.8.8.8; default-lease-time 300; max-lease-time 7500; range dynamic-bootp 172.25.10.10 172.25.10.30 ; ...
4
votes
6answers
159 views

grep with a lot of files which contains a lot of lines?

Imagine we have a lot of huge(30000 line)files: a.2014-05-06, a.2014-05-07, a.2014-05-08 and so on. I know that we can grep a line with word using this command: grep "word" a.* First I guess this ...
-3
votes
2answers
73 views

Extract certain column from CSV files [closed]

I have a directory with a group of CSV files. All files have the same column headers. I need to extract values in a certain column from all files. The common part in files names is ...
0
votes
1answer
54 views

Print lines if pattern is not matched

Print lines of File 1 only if they don't contain patterns specified in File 2 Exemple: $ cat File_1 L1 pattern1 L2 pattern pattern2 L3 pattern3 pattern L4 pattern4 $ cat File_2 ...
5
votes
4answers
211 views

How to replace m part of Lines with n part of Lines?

I have a file "test" like this: RewiteEngine On RewriteCond %{REMOTE_ADDR} !^192\.168\.1\.7$ [NC] RewriteCond %{REMOTE_ADDR} !^192\.168\.1\.8$ [NC] RewriteCond %{REMOTE_ADDR} ...
5
votes
4answers
77 views

Search a pattern and print preceding lines starting with another pattern

I need to grep for a pattern and once I find it, I need to look for another pattern preceding that and print all those lines in between those. Better example: 1 a 2 a 3 a 4 a 5 a 6 b 7 c 8 d 9 xyz ...
1
vote
3answers
96 views

How do I Copy and Paste lines between a start and end keyword?

I have two text files, and I want to copy a bunch of lines from one to the other. File one has a list of packages, and I want to copy it to list two. This list of packages isn't at the start of file ...
1
vote
2answers
36 views

Have grep output spaced for each file

When I do grep on a bunch of files, and several file have the word I am looking for, the output is hard to read as it's one after the other. Is there anyway to insert additional \n's after the ...
2
votes
3answers
101 views

bash - extract filenames from html file containing multiple links

I have downloaded an html file autogenerated by a script on a webpage. The file contains multiple links, including links to images I am trying to extract the full names of the images, for example ...
2
votes
2answers
135 views

tr complains of “Illegal byte sequence”

I'm brand new to UNIX and I am using Kirk McElhearn's "The Mac OS X Command Line" to teach myself some commands. I am attempting to use tr and grep so that I can search for text strings in a regular ...
5
votes
2answers
80 views

Grepping for a block of text with parts that can be optional

I have multiple entries that describes an event in a very large log file, say A.log. I would like to do two things with the event entries in the log file: Count the number of occurrences of each ...
6
votes
8answers
689 views

Grep rest of line…after match

I have a file containing only two lines, with the following structure: $ cat /tmp/pwpower.log 000D6F0000D34227, -114.10 000D6F0001A405C4, -130.09 The values are power values of my solar plant. ...
1
vote
4answers
90 views

Getting data under or above a line

This is my file: print energy 1 end Local net energy (PE 0) = 1.635393034217E+05 kJ/mol Global net ELEC energy = 1.635393034217E+05 kJ/mol print energy 2 end Local net energy (PE 0) = ...
6
votes
10answers
915 views

Copy only Specific text of a file to another

I have a file abc.txt the contents are <classpathentry kind="src" path="Sources"/> <classpathentry kind="con" path="WOFramework/ERExtensions"/> <classpathentry kind="con" ...
4
votes
3answers
169 views

conditional coloring in grep

I have a simple bash script. One line of my script matches a "pattern" with grep and colors the match grep -i --color=always -- "$1" I need to modify it, so that it only colors the match, if the ...
2
votes
4answers
146 views

Color matching but print other lines too [duplicate]

I have an alias: alias grep='grep --color=auto'. I wish to have some way to print not only matching row but all of them and just color matching patterns. I doubt is there an option to do that in the ...
0
votes
2answers
223 views

Compare first column in different files

I want to compare one file with other files in the same directory. file1.txt contains: move 34#123# get 11#278 put 33#29#567#23 file1.txt should compare with files 1.txt and 2.txt. 1.txt ...
3
votes
3answers
202 views

Rearrange text file by prepending data rows with header row

I have a file whose content looks like this: 2009 150 0 0 0 0000 75.316 0.0400390625 0.00007 0.00000 0.8980 76.216 0.0400390625 0.00007 1.00000 0.9046 77.217 0.0400390625 ...
3
votes
4answers
148 views

Identifying genes from a list of genes

I have a gene list file. Some thing like this SWT21 SSA1 NRP1 EFB1 TFC3 MDM10 I have another file which also contains the names of these genes in my list along with other ...
2
votes
1answer
72 views

make grep confirm all matches

I am writing a "unit test" for a bunch of .tex files and want to check for incorrect entity names, e.g. "Data Items" instead of "DataItems". Currently, I use grep to search for the incorrect ...
2
votes
5answers
144 views

identifying words in file 1 and matching them to second file and printing them

I have two files as follows File 1 has list of Ids ram Tarah taikah jhdfklj File 2 has id=ram;*between*hkjhdswklf kjsdklhglshglkhgklsdgkhdfg id=taikah;jhdjfkhg**kjdfkjksfdjk ...
0
votes
4answers
84 views

What are alternative tools for searching files in full content?

I realized that most of the text related tools I use, grep/egrep/awk/sed are line-oriented. I guess that is a simplified approach to search in files but I was wondering if there is another set of ...
5
votes
1answer
198 views

counting multiple patterns in a single pass with grep?

I've written a grep loop to iteratively count DNA trinucleotides within a gzipped DNA fasta file containing DNA sequences e.g. declare -a tri=(AAA AAC AAG AAT CAA .. etc) for i in ${tri[@]} do ...
16
votes
9answers
1k views

Grep lines but let the first line through [duplicate]

Consider the following output from df. Filesystem Size Used Avail Use% Mounted on /dev/sda1 23G 6.1G 16G 29% / udev 10M 0 10M 0% /dev tmpfs 397M 420K ...
1
vote
3answers
1k views

Count tabs per line in text file with utils

I have a tab-tabulated file. I would like to check if every line has the same number of tabs. For first step, I'd like to print the number of tabs for each individual line. I've tried grep -o '\t' ...
3
votes
6answers
1k views

Remove lines that do not start with a pattern from a given set of patterns

I have a file that contains data like this: report aaaaaaaa - .. -th bbbbbbbbb -to ccccccccc .. --. Question: I want to remove any line that does not start with following strings : report ...
1
vote
2answers
479 views

Show only part of the line found by grep (but not the part that matches the pattern)

In ifcfg-eth0, I managed to grep "DEVICE=eth0" by using grep "DEVICE=" ifcfg-eth0 But how can I grep pattern to show only "eth0"?
1
vote
1answer
213 views

How to use awk or sed to convert csv diffs into more readable format

Can anyone give me the example of how to use awk or sed (not sure which one, as I haven't use either of these much, as I have mostly been using grep and cut to work with csv data) to convert ...
12
votes
8answers
1k views

How to perform a multi line grep

How would you perform a grep for text that appears on two lines? For example: pbsnodes is a command I use that returns the utilization of a linux cluster root$ pbsnodes node1 state = free ...
1
vote
1answer
138 views

Retrieving two matches from repeated pattern

How can I retrieve matches from two repeated patterns: mappedname & its value in the text below?. MapName:abc someDiffName=someDiffValue x=3 y=6 NeedyMappedName=NeedyMappedValue . . Flag=true ...
6
votes
5answers
235 views

Get filesystem name and usage with `df -h`

df -h | grep test | sed -e 's/*%.^ //g;s/.*[ ^I]//' Output: /test /test/drv0 /test/drv1 df -h | grep test | cut -d '%' -f1 | sed -e 's/*%.^ //g;s/.*[ ^I]//' Output: 10 20 15 I want to ...
2
votes
2answers
101 views

selecting specific string in a field

I have this file: N104 F1810 N104 F3810 N104 F810 N104 F305 and a script to grep an input. Script: enter input read input cat file | grep $input when I input “810”, I get the ...
0
votes
2answers
117 views

Count lines with alphabet in linux

I have a file with a number of lines in a file filename. I want to count how many lines start with character 'a', with 'b' and so on in one go. What command i should execute.?
2
votes
3answers
424 views

How to grep the last number on a line in a bash script

I have output from the smartctl -a command; one of the lines looks like this: 9 Power_On_Hours 0x0032 100 100 000 Old_age Always - 301 I've placed this into a variable (if that's the correct term) ...
4
votes
2answers
168 views

Printing lines from one file if part of them appears in another. Both files are millions of lines long

I have two files, let's call them 123.txt and 789.txt. 123.txt is 2.5M lines long, and 789.txt is 65M lines long. Is there any way to use grep or similar to keep any lines from 789.txt that contain ...
1
vote
1answer
57 views

How to use GNU tools to extract and merge two substrings of the same string?

Suppose I get the following result after doing a grep "emailed" /home/John/logs/2013-07-10.171222-0400EDT.html:I have emailed Mark. Thanks I want to extract the date from this so that my output ...
0
votes
1answer
55 views

Is there a grep switch that reads a file for filter terms?

Assuming file a.txt has: 1a 2b 3c 4d so grep "1" a.txt would return: 1a and grep "3" a.txt would return: 3c what if i want to put a criteria file named crit.txt with the following ...
1
vote
2answers
91 views

Grep and sort several unsorted things in several lines (in one document)

I have a file with several unsorted things in one line which I want to put into a new file This is an example of part of the file I have: X1314448: SaMi|SM_g2554.t1 SaMi|SM_g5072.t1 Des|Des_g3808.t1 ...
4
votes
2answers
593 views

How to adjust column width in Linux command output

When I used this command on Red Hat Linux /usr/sbin/ss -i I get the following output below: State Recv-Q Send-Q Local Address:Port ...
3
votes
2answers
134 views

Can I make grep treat escaped multiline as a single line?

How can I make tools like grep treat multilines escaped with a backslash as a long single line? Let's say I have some files that looks like this: testvar=test1 \ test2 \ test3 ...
1
vote
2answers
266 views

How to count the number of words and print the lines that match exactly a given pattern?

I want to count the number of words and print the matched pattern lines which matches exactly with following pattern: abc-ERROR: The input File contains: # abc-ERROR: xyxxkkfgfr # def-Error: ...
2
votes
2answers
277 views

add “#” in begining to selected lines in File

Requirement : ADD someting (i.e #) in begining of every line in file A which is grep from file B File A abcd abdc sdfg asdfa jon ram File B jon abcd grep file B from file A and add "#" ...
4
votes
4answers
602 views

Count lines matching pattern and matching previous line

I want to count the number of times that a role is successfully deleted. The problem is that one line of the log file will show that the script is about to delete the role: Prepare to remove role X ...
1
vote
4answers
2k views

Getting a list of users by grepping /etc/passwd

For a homework assignment, I need to use grep to parse /etc/passwd and get a list of all users (their usernames only, nothing else). It should use a pipe, and the results should end up in the allusers ...
2
votes
2answers
199 views

using grep to show entries that match a pattern and are present at least X times

I have a file that have entries like this among other lines Feb 16 17:30:18 ns1 dovecot: pop3-login: Disconnected (auth failed, 1 attempts in 17 secs): user=<accountin@myserver.com>, ...