Files containing data arrange in a table, often with commas (hence Comma Separated Values), to separate columns. Rows are separated by newlines (but not all newlines are row separators as fields can be quoted to contain the separator newlines. Use this tag for full-fledged CSV data not the simpler ...

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34
votes
13answers
16k views

Is there a robust command line tool for processing csv files?

I work with CSV files and sometimes need to quickly check the contents of a row or column from the command line. In many cases cut, head, tail, and friends will do the job; however, cut cannot easily ...
14
votes
7answers
24k views

Remove comma between the quotes only in a comma delimited file

I have a input file delimited with commas (,). There are some fields enclosed in double quotes that are having a comma in them. Here is the sample row 123,"ABC, DEV 23",345,534.202,NAME I need to ...
19
votes
5answers
37k views

How to manipulate a CSV file with sed or awk?

How can I do the following to a CSV file using sed or awk? Delete a column Duplicate a column Move a column I have a big table with over 200 rows, and I'm not that familiar with sed.
8
votes
3answers
3k views

Remove only the commas present within the double quotes

In a text file, I want to remove , (commas) and also the " (quotes) (only if the double quotes contains numbers seperated by commas). 56,72,"12,34,54",x,y,"foo,a,b,bar" Expected ouput ...
5
votes
5answers
20k views

extract the 4th column from a csv file using unix command

I have a csv file formatted as below. "col1","col2","col3","col4" "1","text1","<p>big html text</p> ","4th column" "2","text2","<p>big2 html2 text2</p> ...
1
vote
4answers
227 views

Changing column of multiple csv files

I have a csv file called scenario1.csv in which the second column has column names like "0-4 years high risk", "65+ years first responder" etc. There are 20 such values. The 21st row, 2nd column has ...
1
vote
2answers
3k views

Sorting a csv file [duplicate]

I need to sort a CSV file, but the the header row (1st row) keeps getting sorted. This is what I'm using: cat data1.csv | sort -t"|" -k 1 -o data1.csv Here's a sample line: ...
40
votes
4answers
12k views

sort inplace - like sed --in-place - exists?

Am I blind or is there no option like --in-place for sort? In order to save results to the input file, sed uses -i (--in-place). Redirecting the output of sort to the input file sort < f > f ...
7
votes
5answers
26k views

Parsing a delimited text file in bash as command arguments

I have a text file split up like so: field1,field2,field3 xield1,xield2,xield3 dield1,dield2,dield3 gield1,gield2,gield3 Each of these columns will be a parameter to a program, and I would like ...
5
votes
4answers
3k views

A unix command to truncate each line of a file

I have a CSV file and I want to truncate it from the third semicolon. For example, if I have this file: 1;foo;bar;baz;x;y;z 2;foo;bar;baz;x;y;z 3;foo;bar;baz;x;y;z I want to get the following ...
9
votes
2answers
2k views

How to display TSV (csv) in console, when empty cells are missed by: `column -t -s $'\t' `

I have file with columns spearated with tab. I have file when some rows have empty cells (on begining, in middle). In such cases column -t -s $'\t' simply fails: Input: $ echo -e ...
4
votes
3answers
123 views

Delete consecutive lines in CSV with duplicate values in one field, but keep the last line

I have a long CSV file with two columns, which includes runs of consecutive duplicates like this: ... 1500,1533 1554,1678 1554,1703 1554,1728 1593,1766 ... I need to delete all of these duplicates ...
2
votes
4answers
2k views

Format a Date field of a .CSV file with multiple commas in a string field

I have a .CSV file (file.csv) whose data are all enclosed in double quotes. Sample format of the file is as below: column1,column2,column3,column4,column5,column6, column7, Column8, Column9, Column10 ...
2
votes
4answers
1k views

gawk join two TSV by columns (a'la sql join)

How to join, to tsv files, examples: a.tsv c 7 r z d 6 s w f 1 f f b 8 p y a 9 q x b.tsv a q a c r ccc b p bb 0 0 0 d s dddd Here I'd like to ...
1
vote
2answers
2k views

Open CSV File And Go Straight To Spreadsheet

Part of my software issues various commands to open and view different file types. For instance I use atril for PDFs and eom for PNGs. However I have a slight problem with CSV files. I can open them ...
5
votes
4answers
3k views

Concatenate filename inside of CSV file for each line for multiple CSV files

I have lots of CSV files and I need the filename of each specific CSV file in every line of each file. Original file content of abc123.csv: ColVal_1;ColVal_2;ColVal_3 ColVal_4;ColVal_5;ColVal_6 ...
3
votes
5answers
547 views

Efficient data extraction from multiple files to a single CSV file

I have a large collection of XML files with the same exact structure: $ cat file_<ID>.xml ... ... ... <double>1.2342</double> <double>2.3456</double> ...
3
votes
2answers
9k views

Convert csv to HTML table

I have a Medical.csv file with rows of following format, field: 'participation.type', displayName: 'program_type', type: 'String',path:'participation' field: 'participation.program', ...
3
votes
4answers
19k views

How can I find and replace with a new line?

I have a CSV delimited by commas and I want to delimit it by newlines instead. Input: a, b, c Output: a b c I've written Java parsers that do this stuff, but couldn't this be done with vim or ...
2
votes
2answers
601 views

Merge csv files with conditions

I have 2 CSV files for each date (csv_2014_4_15 and csv_2014_4_16) , with basic structure and couple of unique columns as below. id,name,created_at,updated_at,other columns 12, joe, 2013-1-1 18:30, ...
1
vote
0answers
43 views

CSV copyscript not copying 5 files out of 4000+

I was provided a great bit of code for searching and copying files listed in a csv from a directory and its subfolders in an answer to my previous question. However, some files are not copied. The ...
1
vote
3answers
216 views

Help with awk / sed shell script

I have to make a script using the info in the following table (fake info) AnimalNumber,DOB,Gender,Breed,Date-moved-in IE161289240602,04/02/2010,M,AAX,20/07/2011, ...
1
vote
2answers
319 views

Remove lines from CSV file if the second column is in a word list

I have found a long list of free email providers that I want to remove from my email lists - https://gist.github.com/tbrianjones/5992856 Below are two commands I currently use that do the same job ...
1
vote
1answer
3k views

Confused about how to convert XML to CSV using xmlstarlet on OS X?

I asked a question earlier and it was closed as being a duplicate: How to parse XML to CSV with a shell script?. The answer in the duplicate that was linked suggested using a tool called XMLStarlet, ...
1
vote
1answer
481 views

Need help processing a text file with awk to conform to CSV flat file format

I have the following problem. I collected data on reaction time from over 100 participants for an experiment I am running. Unfortunately, the separators between fields were not consistent, but after a ...
0
votes
2answers
3k views

convert xml to csv

i need to convert a xml to csv using script. I found a solution with xmlstarlet but it is not available so i am returning to point 0. Here is my xml. <root> <record> ...
0
votes
3answers
717 views

How can I select columns based on a control file with invalid column numbers?

I have to generate the file dynamically from the source file based on the below control file. control_file.txt 1,3,5,-1,8,-1,4 The control file contains the position of columns which I require ...